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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866807.1_cds_XP_016432874.1_29078
CDS Infomation

[gene=LOC107759446] [db_xref=GeneID:107759446] [protein=polygalacturonase-like] [protein_id=XP_016432874.1] [location=complement(join(40271..40516,41168..41683,42172..42483,43060..43191))] [gbkey=CDS]
Sequence

ATGTATTTGAACTTCAAATTACCATTTGCATTTGCACTTGTATTTCTAGTGTACACAGGA
GAATCTCAACCTGCAGTTTTTGATGTGACTAAATTTGGTGCAAAGCCTGATAGCAATGAA
GATATTAGCAAGGCTCTATTAAGTGCATTTAAGGAGGCATGCAATTCAAAAATCCCAAGT
AAAGTTGTGATCCCAAAAGGCATATATTTGATGAATCAAGTGAGGCTAGAAGGTAATTGC
AAAGCCCCTATAGAACTTCAAATTCAAGTCACTTTGAAAGCTCCTCCAAATCCAAGCCAA
CTCAAGAAAGATATGGAATGGTTAACTATTAATCATATTGATCATTTCACACTATCTGGT
GGTGGAATTTTTGATGGCCAAGGAGAACAAGGTTGGGCACAAAATGACTGTAAAAATTCA
GAAAGTTGCGGTAAACTTCTGAATAATTTGAGCTTCAACTTTCTGACAAATTCCATAATC
AGAGACATAACTTCATTGGACAGCAAATTATTCCATATTAATGTGTTAGGGTGCAAGAAC
TTAACCTTCATTGGAGTTAACATAAAACCTCCAGCACAAAGCCTAAACACAGATGGTATC
CATGTTGCAAGATCAAGAGGTGTAAACATCACAAATTCACAAATTGGCACAGGAGATGAT
TGCATATCAATTGGTGATGGAGTTCAACAAATGTACATAACAAATGTGACATGTGGACCT
GGCCATGGAATTAGTGTTGGTAGCCTAGGAAAAACTCCAGGGGAATTGCCTGTGGTTGGA
GTTTTTGTGCAAAATTGCACATTTATTGACACTGACAATGGTGTAAGGGTGAAGACATGG
CCAGCTTCACATAATGGTGTTGTTAGAGATTTGCACTATGAGGATATTATTGTGCAAAAT
GTTAGCAATCCTGTTGTCATTGATCAACTCTATTGCCCTTATAATCAGTGCAAGAAAGAT
TTGCCATCACAAGTGAAGATTAGCAAAGTGAGTTTCAAGAACATACGAGGAACATCAAGA
ACTCAAGATGCTATACAAATTAACTGCAGTAAAGGTGTGCCATGTGAAGGTGTAGAAGTT
GGAGATATTGACATAACCTATAAGGGAAATGAAGGGCCAGCCAAGTCTAGTTGCCAGAAT
GTTGACCCAAGTTTTGTAGGCAAGCAGAATCCACCAGTCTGCACTAGTTCTGCAGAGTCT
TCTTGA

Peptide Sequence

PEP ID

XP_016432874.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MYLNFKLPFAFALVFLVYTGESQPAVFDVTKFGAKPDSNEDISKALLSAFKEACNSKIPS
KVVIPKGIYLMNQVRLEGNCKAPIELQIQVTLKAPPNPSQLKKDMEWLTINHIDHFTLSG
GGIFDGQGEQGWAQNDCKNSESCGKLLNNLSFNFLTNSIIRDITSLDSKLFHINVLGCKN
LTFIGVNIKPPAQSLNTDGIHVARSRGVNITNSQIGTGDDCISIGDGVQQMYITNVTCGP
GHGISVGSLGKTPGELPVVGVFVQNCTFIDTDNGVRVKTWPASHNGVVRDLHYEDIIVQN
VSNPVVIDQLYCPYNQCKKDLPSQVKISKVSFKNIRGTSRTQDAIQINCSKGVPCEGVEV
GDIDITYKGNEGPAKSSCQNVDPSFVGKQNPPVCTSSAESS

Transcript Sequence

Gene sequence data has not been registered.